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metaclade2
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Riccardo Vicedomini
metaclade2
Commits
998de300
Commit
998de300
authored
Nov 08, 2020
by
Riccardo Vicedomini
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minor update in output and cfg files
parent
17895f2f
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2 changed files
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4 additions
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3 deletions
+4
-3
mclade.default.cfg
config/mclade.default.cfg
+3
-2
metaclade2
metaclade2
+1
-1
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config/mclade.default.cfg
View file @
998de300
...
...
@@ -4,7 +4,8 @@
mclade_root =
[metaclade]
models_path = /data2/home/vicedomini/databases/metaclade2/models
models_path = /home/blachon/Documents/Tools/MetaCLADE_models/models
;ccms_path = /home/vicedomini/projects/metaclade2/data/models/CCMsRed
ccms_path = %(models_path)s/CCMs
ccms_ext = .hmm.gz
hmms_path = %(models_path)s/HMMs
...
...
@@ -30,7 +31,7 @@ dama_arch = %(scripts_path)s/dama_arch.py
hmmsearch_exec = hmmsearch
;python_path =
python_exec = python3
dama_path = /
share/app
s/DAMA/Release/src
dama_path = /
home/blachon/Documents/Tool
s/DAMA/Release/src
dama_exec = DAMA
[run]
...
...
metaclade2
View file @
998de300
...
...
@@ -264,7 +264,7 @@ if [ $? -ne 0 ]; then
fi
print_status
"MetaCLADE working directory:
${
MCLADE_WORKDIR
}
"
if
[
-z
"
${
MCLADE_OUTFILE
}
"
]
;
then
MCLADE_OUTFILE
=
"
${
MCLADE_WORKDIR
}
"
/
"
${
MCLADE_JOBNAME
}
"
.arch.t
xt
;
fi
if
[
-z
"
${
MCLADE_OUTFILE
}
"
]
;
then
MCLADE_OUTFILE
=
"
${
MCLADE_WORKDIR
}
"
/
"
${
MCLADE_JOBNAME
}
"
.arch.t
sv
;
fi
print_status
"output will be saved to:
${
MCLADE_OUTFILE
}
"
# Create MetaCLADE scripts
...
...
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