Commit 998de300 by Riccardo Vicedomini

minor update in output and cfg files

parent 17895f2f
...@@ -4,7 +4,8 @@ ...@@ -4,7 +4,8 @@
mclade_root = mclade_root =
[metaclade] [metaclade]
models_path = /data2/home/vicedomini/databases/metaclade2/models models_path = /home/blachon/Documents/Tools/MetaCLADE_models/models
;ccms_path = /home/vicedomini/projects/metaclade2/data/models/CCMsRed
ccms_path = %(models_path)s/CCMs ccms_path = %(models_path)s/CCMs
ccms_ext = .hmm.gz ccms_ext = .hmm.gz
hmms_path = %(models_path)s/HMMs hmms_path = %(models_path)s/HMMs
...@@ -30,7 +31,7 @@ dama_arch = %(scripts_path)s/dama_arch.py ...@@ -30,7 +31,7 @@ dama_arch = %(scripts_path)s/dama_arch.py
hmmsearch_exec = hmmsearch hmmsearch_exec = hmmsearch
;python_path = ;python_path =
python_exec = python3 python_exec = python3
dama_path = /share/apps/DAMA/Release/src dama_path = /home/blachon/Documents/Tools/DAMA/Release/src
dama_exec = DAMA dama_exec = DAMA
[run] [run]
......
...@@ -264,7 +264,7 @@ if [ $? -ne 0 ]; then ...@@ -264,7 +264,7 @@ if [ $? -ne 0 ]; then
fi fi
print_status "MetaCLADE working directory: ${MCLADE_WORKDIR}" print_status "MetaCLADE working directory: ${MCLADE_WORKDIR}"
if [ -z "${MCLADE_OUTFILE}" ]; then MCLADE_OUTFILE="${MCLADE_WORKDIR}"/"${MCLADE_JOBNAME}".arch.txt; fi if [ -z "${MCLADE_OUTFILE}" ]; then MCLADE_OUTFILE="${MCLADE_WORKDIR}"/"${MCLADE_JOBNAME}".arch.tsv; fi
print_status "output will be saved to: ${MCLADE_OUTFILE}" print_status "output will be saved to: ${MCLADE_OUTFILE}"
# Create MetaCLADE scripts # Create MetaCLADE scripts
......
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