When your MSA file contains a subset of the real protein
(such as your MSA file contains residues 520-5207 instead
of 1-5207), it becomes problematic to write csv output with
correct residue IDs. I corrected this problem even though
it is not a common problem.

csv output for escott is 1-ranksorted scores given in
myProt_normPredCombi.txt file. It contains 1 column for indices plus
20 columns for each residue. csv output for prescott is exacly in the
same format. However, population information coming from the
gnomad file modulated some data points. The csv files can be visualized in
MS Excel or any other spreadsheet program.
is in the exactly

If a pdbfile is provided, normweightmode becomes sstjetormaxtwocomponent automatically. Else, it is tjet.