- 19 Dec, 2023 1 commit
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Mustafa Tekpinar authored
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- 05 Dec, 2023 1 commit
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Column names in raw escott full single point mutational files (such as BLAT_normPred_evolCombi.txt, BLAT_normPred_evolEpi.txt and BLAT_normPred_evolInd.txt) were V1 V2.....Vn, where n is number of residues in the protein. I replaced those V letters with correct single amino acid identifiers.
Mustafa Tekpinar authored
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- 04 Dec, 2023 1 commit
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Mustafa Tekpinar authored
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- 30 Nov, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 21 Nov, 2023 2 commits
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Mustafa Tekpinar authored
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When your MSA file contains a subset of the real protein (such as your MSA file contains residues 520-5207 instead of 1-5207), it becomes problematic to write csv output with correct residue IDs. I corrected this problem even though it is not a common problem.
Mustafa Tekpinar authored
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- 17 Nov, 2023 2 commits
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Mustafa Tekpinar authored
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csv output for escott is 1-ranksorted scores given in myProt_normPredCombi.txt file. It contains 1 column for indices plus 20 columns for each residue. csv output for prescott is exacly in the same format. However, population information coming from the gnomad file modulated some data points. The csv files can be visualized in MS Excel or any other spreadsheet program. is in the exactly
Mustafa Tekpinar authored
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- 16 Nov, 2023 1 commit
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Mustafa Tekpinar authored
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- 07 Nov, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 06 Nov, 2023 1 commit
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Mustafa Tekpinar authored
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- 26 Oct, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 25 Oct, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 24 Oct, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 18 Oct, 2023 1 commit
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Mustafa Tekpinar authored
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- 11 Oct, 2023 1 commit
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Mustafa Tekpinar authored
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- 10 Oct, 2023 3 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 06 Oct, 2023 1 commit
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Mustafa Tekpinar authored
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- 04 Oct, 2023 3 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 03 Oct, 2023 1 commit
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Mustafa Tekpinar authored
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- 29 Sep, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 27 Sep, 2023 4 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 19 Sep, 2023 1 commit
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Mustafa Tekpinar authored
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- 14 Sep, 2023 2 commits
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Mustafa Tekpinar authored
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Mustafa Tekpinar authored
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- 11 Aug, 2023 1 commit
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Mustafa Tekpinar authored
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- 09 Aug, 2023 1 commit
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Mustafa Tekpinar authored
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