- 22 Sep, 2023 4 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 18 Sep, 2023 3 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 11 Sep, 2023 2 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 08 Sep, 2023 3 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 05 Sep, 2023 1 commit
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Konstantin Volzhenin authored
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- 01 Sep, 2023 3 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 08 Aug, 2023 2 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 02 Aug, 2023 1 commit
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Konstantin Volzhenin authored
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- 01 Aug, 2023 4 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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- 28 Jul, 2023 1 commit
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Konstantin Volzhenin authored
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- 27 Jul, 2023 4 commits
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Konstantin Volzhenin authored
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0.1.9 mps now works but only to compute the ESM2 embeddings, removed redundancy in predict_string.py
Konstantin Volzhenin authored -
Konstantin Volzhenin authored
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GPU running fixed
Konstantin Volzhenin authored
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- 26 Jul, 2023 4 commits
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bugfix in params.device
Konstantin Volzhenin authored -
output contains gene names instead of STRING IDs
Konstantin Volzhenin authored -
Datasets are now taken from STRING v12.0 model.py - batch_size and lr defaults are 32 and 1e-4 respectively commands are edited with respect to new version of STRING
Konstantin Volzhenin authored -
0.1.3 fixed max_len bug in dataset.py (was not transfered first due to a wrong final version in previous repository)
Konstantin Volzhenin authored
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- 25 Jul, 2023 8 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Comments, arguments and outdated code have to be cleaned, the version still needs some testing
Konstantin Volzhenin authored -
Working commands: predict, test, string_dataset_create train and predict_string are still in progress
Konstantin Volzhenin authored -
Konstantin Volzhenin authored
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