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Konstantin Volzhenin
SENSE-PPI
Commits
31ab3524
Commit
31ab3524
authored
Feb 02, 2024
by
Konstantin Volzhenin
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0.6.7 removed plt.show() from predict_string
parent
d872bf96
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2 additions
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2 deletions
+2
-2
.gitignore
.gitignore
+1
-0
__init__.py
senseppi/__init__.py
+1
-1
predict_string.py
senseppi/commands/predict_string.py
+0
-1
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.gitignore
View file @
31ab3524
...
...
@@ -127,6 +127,7 @@ dmypy.json
/esm2_embs_3B
*.sh
draft.py
draft.ipynb
/data/string_species/mmseqs_dbs_orig/
/data/human_virus/all_test_viruses.csv
/esm2_backup
...
...
senseppi/__init__.py
View file @
31ab3524
__version__
=
"0.6.
6
"
__version__
=
"0.6.
7
"
__author__
=
"Konstantin Volzhenin"
from
.
import
model
,
commands
,
esm2_model
,
dataset
,
utils
,
network_utils
...
...
senseppi/commands/predict_string.py
View file @
31ab3524
...
...
@@ -153,7 +153,6 @@ def main(params):
save_path
=
'{}_graph_{}_{}.pdf'
.
format
(
params
.
output
,
'_'
.
join
(
params
.
genes
),
params
.
species
)
plt
.
savefig
(
save_path
,
bbox_inches
=
'tight'
,
dpi
=
600
)
print
(
"The graphs were saved to: "
,
save_path
)
plt
.
show
()
plt
.
close
()
except
Exception
as
e
:
raise
e
...
...
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