Commit fd1557f5 by Mustafa Tekpinar

Trying to solve importlib.resource files problem.

parent 12d7708d
......@@ -26,8 +26,6 @@ RUN apt-get update --fix-missing && \
apt-get install -y --no-install-recommends apt-utils &&\
apt-get install -y software-properties-common && \
apt-get install -y build-essential && \
apt-get install -y python3-dev && \
apt-get install -y python3-pip && \
apt-get install -y r-base r-base-core && \
apt-get install -y muscle && \
apt-get install -y dssp && \
......@@ -39,6 +37,14 @@ apt-get install -y wget && \
apt-get install csh && \
apt-get install -y hmmer && \
apt-get clean && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
RUN add-apt-repository ppa:deadsnakes/ppa
RUN apt-get update --fix-missing && \
apt-get -y install python3.9 &&\
apt-get install -y python3-dev && \
apt-get install -y python3-pip && \
apt-get clean && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
###################################################################
RUN wget https://github.com/soedinglab/hh-suite/releases/download/v3.3.0/hhsuite-3.3.0-AVX2-Linux.tar.gz
RUN mkdir hhsuite
......@@ -49,7 +55,7 @@ RUN tar xvfz hhsuite-3.3.0-AVX2-Linux.tar.gz
ENV PATH="/home/tekpinar/research/lcqb/hhsuite/bin:/home/tekpinar/research/lcqb/hhsuite/scripts:$PATH"
RUN rm -f hhsuite-3.3.0-AVX2-Linux.tar.gz
RUN ln -s /usr/bin/python3 /usr/bin/python
RUN ln -s /usr/bin/python3.9 /usr/bin/python
WORKDIR /home/tekpinar/research/lcqb
RUN pip3 install -e ./ESGEMME/
......
......@@ -45,8 +45,6 @@ setup(name='esgemme',
'Environment :: Console',
'Operating System :: POSIX',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.7',
'Programming Language :: Python :: 3.8',
'Programming Language :: Python :: 3.9',
'License :: OSI Approved :: MIT License',
'Intended Audience :: Science/Research',
......
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