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PRESCOTT
Commit 1fd6d4c4 by Mustafa Tekpinar
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Updated documentation.

parent 19352aaf
Showing with 161 additions and 158 deletions
Dockerfile
...@@ -112,5 +112,5 @@ RUN pip3 install https://github.com/debbiemarkslab/EVcouplings/archive/develop.z ...@@ -112,5 +112,5 @@ RUN pip3 install https://github.com/debbiemarkslab/EVcouplings/archive/develop.z
#If you want to use the docker image like an executable file: #If you want to use the docker image like an executable file:
# Please note that you must have aliBLAT.fasta and blat-af2.pdb inside your current folder and run this command! # Please note that you must have aliBLAT.fasta and blat-af2.pdb inside your current folder and run this command!
# sudo docker run --rm -v $PWD:/home/tekpinar/research/lcqb tekpinar/prescott-docker:v1.4.0 escott aliBLAT.fasta -r input -f aliBLAT.fasta --pdbfile blat-af2.pdb # sudo docker run --rm -v $PWD:/home/tekpinar/research/lcqb tekpinar/prescott-docker:v1.4.0 escott aliBLAT.fasta -f aliBLAT.fasta --pdbfile blat-af2.pdb
docs/_build/html/.buildinfo
# Sphinx build info version 1 # Sphinx build info version 1
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config: fe2e7449c75c4a1331acfe403ef4e427 config: dbe0b599dc686a00746813e2a7a94d25
tags: 645f666f9bcd5a90fca523b33c5a78b7 tags: 645f666f9bcd5a90fca523b33c5a78b7
docs/_build/html/analysis.html
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<meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" /> <meta charset="utf-8" /><meta name="generator" content="Docutils 0.18.1: http://docutils.sourceforge.net/" />
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<title>Analyzing and Modifying the PRESCOTT Output &mdash; esgemme 1.4.0 documentation</title> <title>Analyzing and Modifying the PRESCOTT Output &mdash; prescott 1.4.0 documentation</title>
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...@@ -32,7 +32,7 @@ ...@@ -32,7 +32,7 @@
<a href="index.html" class="icon icon-home"> <a href="index.html" class="icon icon-home">
esgemme prescott
</a> </a>
<div role="search"> <div role="search">
<form id="rtd-search-form" class="wy-form" action="search.html" method="get"> <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
...@@ -46,7 +46,7 @@ ...@@ -46,7 +46,7 @@
<ul class="current"> <ul class="current">
<li class="toctree-l1"><a class="reference internal" href="docker.html">Using PRESCOTT via Docker</a></li> <li class="toctree-l1"><a class="reference internal" href="docker.html">Using PRESCOTT via Docker</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Analyzing and Modifying the PRESCOTT Output</a><ul> <li class="toctree-l1 current"><a class="current reference internal" href="#">Analyzing and Modifying the PRESCOTT Output</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#raw-esgemme-scores-and-their-interpretation">Raw PRESCOTT Scores and Their Interpretation</a></li> <li class="toctree-l2"><a class="reference internal" href="#raw-prescott-scores-and-their-interpretation">Raw PRESCOTT Scores and Their Interpretation</a></li>
<li class="toctree-l2"><a class="reference internal" href="#entire-single-point-mutation-landscape-calculations">Entire Single Point Mutation Landscape Calculations</a></li> <li class="toctree-l2"><a class="reference internal" href="#entire-single-point-mutation-landscape-calculations">Entire Single Point Mutation Landscape Calculations</a></li>
<li class="toctree-l2"><a class="reference internal" href="#selected-single-point-or-multiple-point-mutation-calculations">Selected Single Point or Multiple Point Mutation Calculations</a></li> <li class="toctree-l2"><a class="reference internal" href="#selected-single-point-or-multiple-point-mutation-calculations">Selected Single Point or Multiple Point Mutation Calculations</a></li>
</ul> </ul>
...@@ -61,7 +61,7 @@ ...@@ -61,7 +61,7 @@
<section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" > <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" >
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<a href="index.html">esgemme</a> <a href="index.html">prescott</a>
</nav> </nav>
<div class="wy-nav-content"> <div class="wy-nav-content">
...@@ -79,10 +79,10 @@ ...@@ -79,10 +79,10 @@
<div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article"> <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
<div itemprop="articleBody"> <div itemprop="articleBody">
<section id="analyzing-and-modifying-the-esgemme-output"> <section id="analyzing-and-modifying-the-prescott-output">
<h1>Analyzing and Modifying the PRESCOTT Output<a class="headerlink" href="#analyzing-and-modifying-the-esgemme-output" title="Permalink to this heading"></a></h1> <h1>Analyzing and Modifying the PRESCOTT Output<a class="headerlink" href="#analyzing-and-modifying-the-prescott-output" title="Permalink to this heading"></a></h1>
<section id="raw-esgemme-scores-and-their-interpretation"> <section id="raw-prescott-scores-and-their-interpretation">
<h2>Raw PRESCOTT Scores and Their Interpretation<a class="headerlink" href="#raw-esgemme-scores-and-their-interpretation" title="Permalink to this heading"></a></h2> <h2>Raw PRESCOTT Scores and Their Interpretation<a class="headerlink" href="#raw-prescott-scores-and-their-interpretation" title="Permalink to this heading"></a></h2>
<p>There is not a hardcoded limit for raw PRESCOTT scores. However, the values <p>There is not a hardcoded limit for raw PRESCOTT scores. However, the values
range between [-12, 2] generally. The lower values mean the mutations is impactful, range between [-12, 2] generally. The lower values mean the mutations is impactful,
while values close to 0 means the mutation does not have any significant impact.</p> while values close to 0 means the mutation does not have any significant impact.</p>
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docs/_build/html/docker.html
...@@ -4,7 +4,7 @@ ...@@ -4,7 +4,7 @@
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<title>Using PRESCOTT via Docker &mdash; esgemme 1.4.0 documentation</title> <title>Using PRESCOTT via Docker &mdash; prescott 1.4.0 documentation</title>
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...@@ -32,7 +32,7 @@ ...@@ -32,7 +32,7 @@
<a href="index.html" class="icon icon-home"> <a href="index.html" class="icon icon-home">
esgemme prescott
</a> </a>
<div role="search"> <div role="search">
<form id="rtd-search-form" class="wy-form" action="search.html" method="get"> <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
...@@ -67,7 +67,7 @@ ...@@ -67,7 +67,7 @@
<section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" > <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" >
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<div itemprop="articleBody"> <div itemprop="articleBody">
<section id="using-esgemme-via-docker"> <section id="using-prescott-via-docker">
<h1>Using PRESCOTT via Docker<a class="headerlink" href="#using-esgemme-via-docker" title="Permalink to this heading"></a></h1> <h1>Using PRESCOTT via Docker<a class="headerlink" href="#using-prescott-via-docker" title="Permalink to this heading"></a></h1>
<section id="requirements"> <section id="requirements">
<h2>Requirements<a class="headerlink" href="#requirements" title="Permalink to this heading"></a></h2> <h2>Requirements<a class="headerlink" href="#requirements" title="Permalink to this heading"></a></h2>
<p>You need to have docker installed on your machine. You can consult the <p>You need to have docker installed on your machine. You can consult the
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docs/_build/html/genindex.html
...@@ -3,7 +3,7 @@ ...@@ -3,7 +3,7 @@
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<title>Welcome to esgemme’s documentation! &mdash; esgemme 1.4.0 documentation</title> <title>Welcome to esgemme’s documentation! &mdash; prescott 1.4.0 documentation</title>
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esgemme prescott
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...@@ -87,7 +87,7 @@ ...@@ -87,7 +87,7 @@
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<li class="toctree-l1"><a class="reference internal" href="analysis.html">Analyzing and Modifying the PRESCOTT Output</a><ul> <li class="toctree-l1"><a class="reference internal" href="analysis.html">Analyzing and Modifying the PRESCOTT Output</a><ul>
<li class="toctree-l2"><a class="reference internal" href="analysis.html#raw-esgemme-scores-and-their-interpretation">Raw PRESCOTT Scores and Their Interpretation</a></li> <li class="toctree-l2"><a class="reference internal" href="analysis.html#raw-prescott-scores-and-their-interpretation">Raw PRESCOTT Scores and Their Interpretation</a></li>
<li class="toctree-l2"><a class="reference internal" href="analysis.html#entire-single-point-mutation-landscape-calculations">Entire Single Point Mutation Landscape Calculations</a></li> <li class="toctree-l2"><a class="reference internal" href="analysis.html#entire-single-point-mutation-landscape-calculations">Entire Single Point Mutation Landscape Calculations</a></li>
<li class="toctree-l2"><a class="reference internal" href="analysis.html#selected-single-point-or-multiple-point-mutation-calculations">Selected Single Point or Multiple Point Mutation Calculations</a></li> <li class="toctree-l2"><a class="reference internal" href="analysis.html#selected-single-point-or-multiple-point-mutation-calculations">Selected Single Point or Multiple Point Mutation Calculations</a></li>
</ul> </ul>
...@@ -98,7 +98,7 @@ ...@@ -98,7 +98,7 @@
</li> </li>
<li class="toctree-l1"><a class="reference internal" href="installation.html">Installation</a><ul> <li class="toctree-l1"><a class="reference internal" href="installation.html">Installation</a><ul>
<li class="toctree-l2"><a class="reference internal" href="installation.html#installing-the-dependencies">Installing the dependencies:</a></li> <li class="toctree-l2"><a class="reference internal" href="installation.html#installing-the-dependencies">Installing the dependencies:</a></li>
<li class="toctree-l2"><a class="reference internal" href="installation.html#preparation-of-the-environment-and-installation-of-esgemme">Preparation of the environment and installation of PRESCOTT</a></li> <li class="toctree-l2"><a class="reference internal" href="installation.html#preparation-of-the-environment-and-installation-of-prescott">Preparation of the environment and installation of PRESCOTT</a></li>
<li class="toctree-l2"><a class="reference internal" href="installation.html#configuring-default-conf-file">Configuring default.conf file</a></li> <li class="toctree-l2"><a class="reference internal" href="installation.html#configuring-default-conf-file">Configuring default.conf file</a></li>
</ul> </ul>
</li> </li>
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docs/_build/html/input-preparation.html
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<title>Preparing Your Own Input &mdash; esgemme 1.4.0 documentation</title> <title>Preparing Your Own Input &mdash; prescott 1.4.0 documentation</title>
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</a> </a>
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...@@ -48,7 +48,7 @@ ...@@ -48,7 +48,7 @@
<li class="toctree-l1"><a class="reference internal" href="input-preparation.html">Preparing Your Own Input</a></li> <li class="toctree-l1"><a class="reference internal" href="input-preparation.html">Preparing Your Own Input</a></li>
<li class="toctree-l1 current"><a class="current reference internal" href="#">Installation</a><ul> <li class="toctree-l1 current"><a class="current reference internal" href="#">Installation</a><ul>
<li class="toctree-l2"><a class="reference internal" href="#installing-the-dependencies">Installing the dependencies:</a></li> <li class="toctree-l2"><a class="reference internal" href="#installing-the-dependencies">Installing the dependencies:</a></li>
<li class="toctree-l2"><a class="reference internal" href="#preparation-of-the-environment-and-installation-of-esgemme">Preparation of the environment and installation of PRESCOTT</a></li> <li class="toctree-l2"><a class="reference internal" href="#preparation-of-the-environment-and-installation-of-prescott">Preparation of the environment and installation of PRESCOTT</a></li>
<li class="toctree-l2"><a class="reference internal" href="#configuring-default-conf-file">Configuring default.conf file</a></li> <li class="toctree-l2"><a class="reference internal" href="#configuring-default-conf-file">Configuring default.conf file</a></li>
</ul> </ul>
</li> </li>
...@@ -60,7 +60,7 @@ ...@@ -60,7 +60,7 @@
<section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" > <section data-toggle="wy-nav-shift" class="wy-nav-content-wrap"><nav class="wy-nav-top" aria-label="Mobile navigation menu" >
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...@@ -111,8 +111,8 @@ You can open .profile as follows:</p> ...@@ -111,8 +111,8 @@ You can open .profile as follows:</p>
</div> </div>
<p>JET2 is essential and it should be installed to be able to use PRESCOTT.</p> <p>JET2 is essential and it should be installed to be able to use PRESCOTT.</p>
</section> </section>
<section id="preparation-of-the-environment-and-installation-of-esgemme"> <section id="preparation-of-the-environment-and-installation-of-prescott">
<h2>Preparation of the environment and installation of PRESCOTT<a class="headerlink" href="#preparation-of-the-environment-and-installation-of-esgemme" title="Permalink to this heading"></a></h2> <h2>Preparation of the environment and installation of PRESCOTT<a class="headerlink" href="#preparation-of-the-environment-and-installation-of-prescott" title="Permalink to this heading"></a></h2>
<p>Step by step installation on Ubuntu 22.04</p> <p>Step by step installation on Ubuntu 22.04</p>
<p>Prepare your environment and install the required packages:</p> <p>Prepare your environment and install the required packages:</p>
<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>sudo apt-get update --fix-missing <span class="o">&amp;&amp;</span> <span class="se">\</span> <div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>sudo apt-get update --fix-missing <span class="o">&amp;&amp;</span> <span class="se">\</span>
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<div class="wy-nav-content"> <div class="wy-nav-content">
......
docs/_build/latex/esgemme.ilg deleted 100644 → 0
This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning style file ./python.ist.......done (7 attributes redefined, 0 ignored).
Scanning input file esgemme.idx...done (0 entries accepted, 0 rejected).
Nothing written in esgemme.ind.
Transcript written in esgemme.ilg.
docs/_build/latex/esgemme.aux → docs/_build/latex/prescott.aux
...@@ -23,7 +23,7 @@ ...@@ -23,7 +23,7 @@
\@writefile{toc}{\contentsline {chapter}{\numberline {1}Using PRESCOTT via Docker}{1}{chapter.1}\protected@file@percent } \@writefile{toc}{\contentsline {chapter}{\numberline {1}Using PRESCOTT via Docker}{1}{chapter.1}\protected@file@percent }
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\@writefile{lot}{\addvspace {10\p@ }} \@writefile{lot}{\addvspace {10\p@ }}
\newlabel{docker:using-esgemme-via-docker}{{1}{1}{Using PRESCOTT via Docker}{chapter.1}{}} \newlabel{docker:using-prescott-via-docker}{{1}{1}{Using PRESCOTT via Docker}{chapter.1}{}}
\newlabel{docker::doc}{{1}{1}{Using PRESCOTT via Docker}{chapter.1}{}} \newlabel{docker::doc}{{1}{1}{Using PRESCOTT via Docker}{chapter.1}{}}
\@writefile{toc}{\contentsline {section}{\numberline {1.1}Requirements}{1}{section.1.1}\protected@file@percent } \@writefile{toc}{\contentsline {section}{\numberline {1.1}Requirements}{1}{section.1.1}\protected@file@percent }
\newlabel{docker:requirements}{{1.1}{1}{Requirements}{section.1.1}{}} \newlabel{docker:requirements}{{1.1}{1}{Requirements}{section.1.1}{}}
...@@ -42,10 +42,10 @@ ...@@ -42,10 +42,10 @@
\@writefile{toc}{\contentsline {chapter}{\numberline {2}Analyzing and Modifying the PRESCOTT Output}{5}{chapter.2}\protected@file@percent } \@writefile{toc}{\contentsline {chapter}{\numberline {2}Analyzing and Modifying the PRESCOTT Output}{5}{chapter.2}\protected@file@percent }
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\@writefile{lot}{\addvspace {10\p@ }} \@writefile{lot}{\addvspace {10\p@ }}
\newlabel{analysis:analyzing-and-modifying-the-esgemme-output}{{2}{5}{Analyzing and Modifying the PRESCOTT Output}{chapter.2}{}} \newlabel{analysis:analyzing-and-modifying-the-prescott-output}{{2}{5}{Analyzing and Modifying the PRESCOTT Output}{chapter.2}{}}
\newlabel{analysis::doc}{{2}{5}{Analyzing and Modifying the PRESCOTT Output}{chapter.2}{}} \newlabel{analysis::doc}{{2}{5}{Analyzing and Modifying the PRESCOTT Output}{chapter.2}{}}
\@writefile{toc}{\contentsline {section}{\numberline {2.1}Raw PRESCOTT Scores and Their Interpretation}{5}{section.2.1}\protected@file@percent } \@writefile{toc}{\contentsline {section}{\numberline {2.1}Raw PRESCOTT Scores and Their Interpretation}{5}{section.2.1}\protected@file@percent }
\newlabel{analysis:raw-esgemme-scores-and-their-interpretation}{{2.1}{5}{Raw PRESCOTT Scores and Their Interpretation}{section.2.1}{}} \newlabel{analysis:raw-prescott-scores-and-their-interpretation}{{2.1}{5}{Raw PRESCOTT Scores and Their Interpretation}{section.2.1}{}}
\@writefile{toc}{\contentsline {section}{\numberline {2.2}Entire Single Point Mutation Landscape Calculations}{5}{section.2.2}\protected@file@percent } \@writefile{toc}{\contentsline {section}{\numberline {2.2}Entire Single Point Mutation Landscape Calculations}{5}{section.2.2}\protected@file@percent }
\newlabel{analysis:entire-single-point-mutation-landscape-calculations}{{2.2}{5}{Entire Single Point Mutation Landscape Calculations}{section.2.2}{}} \newlabel{analysis:entire-single-point-mutation-landscape-calculations}{{2.2}{5}{Entire Single Point Mutation Landscape Calculations}{section.2.2}{}}
\@writefile{toc}{\contentsline {section}{\numberline {2.3}Selected Single Point or Multiple Point Mutation Calculations}{6}{section.2.3}\protected@file@percent } \@writefile{toc}{\contentsline {section}{\numberline {2.3}Selected Single Point or Multiple Point Mutation Calculations}{6}{section.2.3}\protected@file@percent }
...@@ -65,7 +65,7 @@ ...@@ -65,7 +65,7 @@
\@writefile{toc}{\contentsline {section}{\numberline {4.1}Installing the dependencies:}{9}{section.4.1}\protected@file@percent } \@writefile{toc}{\contentsline {section}{\numberline {4.1}Installing the dependencies:}{9}{section.4.1}\protected@file@percent }
\newlabel{installation:installing-the-dependencies}{{4.1}{9}{Installing the dependencies:}{section.4.1}{}} \newlabel{installation:installing-the-dependencies}{{4.1}{9}{Installing the dependencies:}{section.4.1}{}}
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\newlabel{installation:preparation-of-the-environment-and-installation-of-esgemme}{{4.2}{9}{Preparation of the environment and installation of PRESCOTT}{section.4.2}{}} \newlabel{installation:preparation-of-the-environment-and-installation-of-prescott}{{4.2}{9}{Preparation of the environment and installation of PRESCOTT}{section.4.2}{}}
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\@writefile{toc}{\contentsline {chapter}{\numberline {5}Indices and tables}{13}{chapter.5}\protected@file@percent } \@writefile{toc}{\contentsline {chapter}{\numberline {5}Indices and tables}{13}{chapter.5}\protected@file@percent }
......
docs/_build/latex/esgemme.fdb_latexmk → docs/_build/latex/prescott.fdb_latexmk
# Fdb version 3 # Fdb version 3
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(generated) (generated)
"esgemme.ilg" "prescott.ilg"
"esgemme.ind" "prescott.ind"
["pdflatex"] 1690888278 "esgemme.tex" "esgemme.pdf" "esgemme" 1690888279 ["pdflatex"] 1691770117 "prescott.tex" "prescott.pdf" "prescott" 1691770117
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...@@ -138,37 +138,37 @@ ...@@ -138,37 +138,37 @@
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"esgemme.aux" "prescott.aux"
"esgemme.idx" "prescott.idx"
"esgemme.log" "prescott.log"
"esgemme.out" "prescott.out"
"esgemme.pdf" "prescott.pdf"
"esgemme.toc" "prescott.toc"
docs/_build/latex/esgemme.fls → docs/_build/latex/prescott.fls
...@@ -3,8 +3,8 @@ INPUT /etc/texmf/web2c/texmf.cnf ...@@ -3,8 +3,8 @@ INPUT /etc/texmf/web2c/texmf.cnf
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This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2022/dev/Debian) (preloaded format=pdflatex 2023.6.16) 1 AUG 2023 13:11 This is pdfTeX, Version 3.141592653-2.6-1.40.22 (TeX Live 2022/dev/Debian) (preloaded format=pdflatex 2023.8.3) 11 AUG 2023 18:08
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[]\T1/qtm/m/n/10 Con-grat-u-la-tions! Now, you have all the in-put files re-qui []\T1/qtm/m/n/10 Con-grat-u-la-tions! Now, you have all the in-put files re-qui
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[]\T1/qtm/m/n/10 #Down-load PRESCOTT from [][]$http : / / gitlab . lcqb . upmc
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Chapter 5. Chapter 5.
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docs/_build/latex/esgemme.tex → docs/_build/latex/prescott.tex
...@@ -60,8 +60,8 @@ ...@@ -60,8 +60,8 @@
\title{esgemme} \title{prescott}
\date{Aug 01, 2023} \date{Aug 11, 2023}
\release{1.4.0} \release{1.4.0}
\author{Mustafa Tekpinar} \author{Mustafa Tekpinar}
\newcommand{\sphinxlogo}{\vbox{}} \newcommand{\sphinxlogo}{\vbox{}}
...@@ -86,7 +86,7 @@ ...@@ -86,7 +86,7 @@
\chapter{Using PRESCOTT via Docker} \chapter{Using PRESCOTT via Docker}
\label{\detokenize{docker:using-esgemme-via-docker}}\label{\detokenize{docker::doc}} \label{\detokenize{docker:using-prescott-via-docker}}\label{\detokenize{docker::doc}}
\section{Requirements} \section{Requirements}
\label{\detokenize{docker:requirements}} \label{\detokenize{docker:requirements}}
...@@ -259,10 +259,10 @@ mutation and its predicted effect, separated by a space. ...@@ -259,10 +259,10 @@ mutation and its predicted effect, separated by a space.
\chapter{Analyzing and Modifying the PRESCOTT Output} \chapter{Analyzing and Modifying the PRESCOTT Output}
\label{\detokenize{analysis:analyzing-and-modifying-the-esgemme-output}}\label{\detokenize{analysis::doc}} \label{\detokenize{analysis:analyzing-and-modifying-the-prescott-output}}\label{\detokenize{analysis::doc}}
\section{Raw PRESCOTT Scores and Their Interpretation} \section{Raw PRESCOTT Scores and Their Interpretation}
\label{\detokenize{analysis:raw-esgemme-scores-and-their-interpretation}} \label{\detokenize{analysis:raw-prescott-scores-and-their-interpretation}}
\sphinxAtStartPar \sphinxAtStartPar
There is not a hardcoded limit for raw PRESCOTT scores. However, the values There is not a hardcoded limit for raw PRESCOTT scores. However, the values
range between {[}\sphinxhyphen{}12, 2{]} generally. The lower values mean the mutations is impactful, range between {[}\sphinxhyphen{}12, 2{]} generally. The lower values mean the mutations is impactful,
...@@ -521,7 +521,7 @@ JET2 is essential and it should be installed to be able to use PRESCOTT. ...@@ -521,7 +521,7 @@ JET2 is essential and it should be installed to be able to use PRESCOTT.
\section{Preparation of the environment and installation of PRESCOTT} \section{Preparation of the environment and installation of PRESCOTT}
\label{\detokenize{installation:preparation-of-the-environment-and-installation-of-esgemme}} \label{\detokenize{installation:preparation-of-the-environment-and-installation-of-prescott}}
\sphinxAtStartPar \sphinxAtStartPar
Step by step installation on Ubuntu 22.04 Step by step installation on Ubuntu 22.04
......
docs/conf.py
...@@ -18,7 +18,7 @@ sys.path.insert(0, os.path.abspath('../')) ...@@ -18,7 +18,7 @@ sys.path.insert(0, os.path.abspath('../'))
import sphinx_rtd_theme import sphinx_rtd_theme
# -- Project information ----------------------------------------------------- # -- Project information -----------------------------------------------------
project = 'esgemme' project = 'prescott'
copyright = '2023, Mustafa Tekpinar' copyright = '2023, Mustafa Tekpinar'
author = 'Mustafa Tekpinar' author = 'Mustafa Tekpinar'
......
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