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DLA-Ranker
DLA-Ranker
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528ab31d
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528ab31d
authored
Jun 21, 2022
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DLA-Ranker
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528ab31d
###########################################################################################
# Copyright or © or Copr. Chloé Dequeker, Elodie Laine and Alessandra Carbone (03-jan-2017)
# chloe.dequeker@upmc.fr, elodie.laine@upmc.fr, alessandra.carbone@lip6.fr
# Copyright or © or Copr. (21-June-2017)
# yasser.mohseni_behbahani@sorbonne-universite.fr, simon.crouzet@etu.sorbonne-universite.fr,
# elodie.laine@sorbonne-universite.fr, alessandra.carbone@lip6.fr
# UMR 7238 Biologie Computationnelle et Quantitative
#
# This software is a computer program whose purpose is to compute the interface of
# two PDB. Both PDB are therefore required. Moreover, this software has the advantage
# of parsing the output format of docking software.
#Deep Local Analysis (DLA)-Ranker is a deep learning framework applying 3D convolutions
#to a set of locally oriented cubes representing the protein interface. It explicitly considers
#the local geometry of the interfacial residues along with their neighboring atoms and the regions of
#the interface with different solvent accessibility. DLA-Ranker identifies near-native conformations
#and discovers alternative interfaces from ensembles generated by molecular docking.
#
# This software is governed by the CeCILL license under French law and abiding
# by the rules of distribution of free software. You can use, modify and/or
...
...
@@ -29,5 +32,7 @@
#
# The fact that you are presently reading this means that you have had knowledge
# of the CeCILL license and that you accept its terms.
# The source code of maps_generator is available on demand.
# The 'maps_generator' program was adapted from 'maps_generator' program of Ornate
# (https://academic.oup.com/bioinformatics/article/35/18/3313/5341430?login=true) (all rights reserved)
# and its source code is available on demand.
###########################################################################################
\ No newline at end of file
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