- 26 Jul, 2023 3 commits
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output contains gene names instead of STRING IDs
Konstantin Volzhenin authored -
Datasets are now taken from STRING v12.0 model.py - batch_size and lr defaults are 32 and 1e-4 respectively commands are edited with respect to new version of STRING
Konstantin Volzhenin authored -
0.1.3 fixed max_len bug in dataset.py (was not transfered first due to a wrong final version in previous repository)
Konstantin Volzhenin authored
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- 25 Jul, 2023 9 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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Comments, arguments and outdated code have to be cleaned, the version still needs some testing
Konstantin Volzhenin authored -
Working commands: predict, test, string_dataset_create train and predict_string are still in progress
Konstantin Volzhenin authored -
Konstantin Volzhenin authored
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2. Train function transferred (needs to be checked) 3. Minor changes
Konstantin Volzhenin authored
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- 24 Jul, 2023 2 commits
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First commit of the SENSE-PPI (version 0.1.0, unfinished), only "senseppi predict" is working. Everything else still has to be transferred.
Konstantin Volzhenin authored -
Konstantin Volzhenin authored
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- 19 Jul, 2023 2 commits
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Konstantin Volzhenin authored
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Konstantin Volzhenin authored
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