prescott

Contents:

  • Introduction
  • Using ESCOTT via Docker
  • Analyzing and Modifying the ESCOTT Output
  • Preparing Your Own Input
  • Using ESCOTT via Singularity
  • Installation
prescott
  • Welcome to PRESCOTT documentation!
  • View page source

Welcome to PRESCOTT documentation!

Contents:

  • Introduction
    • What is PRESCOTT?
    • Input Data Requirements
    • Usage
    • Installation
    • Citation
  • Using ESCOTT via Docker
    • Requirements
    • Getting the example input data
    • Single point mutation calculations
    • Multiple point mutation calculations
    • Running several jobs using docker
  • Analyzing and Modifying the ESCOTT Output
    • Raw ESCOTT Scores and Their Interpretation
    • Entire Single Point Mutation Landscape Calculations
    • Selected Single Point or Multiple Point Mutation Calculations
  • Preparing Your Own Input
    • Preparing Your Input MSA and PDB with Colabfold
  • Using ESCOTT via Singularity
  • Installation
    • Installing the dependencies:
    • Preparation of the environment and installation of PRESCOTT
    • Configuring default.conf file

Indices and tables

  • Index

  • Module Index

  • Search Page

Next

© Copyright 2023, Mustafa Tekpinar.

Built with Sphinx using a theme provided by Read the Docs.