@@ -126,9 +126,11 @@ Each output represents interface of a conformation and contains a set of local e
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@@ -126,9 +126,11 @@ Each output represents interface of a conformation and contains a set of local e
Following commands will use the trained models that can be found in the directory 'Models'. This directory includes 3 sets of models:
Following commands will use the trained models that can be found in the directory 'Models'. This directory includes 3 sets of models:
'BM5': 10 models generated following 10-fold cross validation procedure on the 142 dimers of the Docking Benchmakr version 5. The docking conformations had been generated by HADDOCK. <br>
'BM5': 10 models generated following 10-fold cross validation procedure on the 142 dimers of the Docking Benchmakr version 5. The docking conformations had been generated by HADDOCK. See [DeepRank](https://www.nature.com/articles/s41467-021-27396-0). <br>.
'Dockground': 4 models generated following 4-fold cross validation procedure on the 59 target complexes of the Dockground database. The docking conformations had been generated by GRAMM-X. <br>
'CCD4PPI': 5 models generated following 5-fold cross validation procedure on the 400 target complexes. <br>
'Dockground': 4 models generated following 4-fold cross validation procedure on the 59 target complexes of the Dockground database. The docking conformations had been generated by GRAMM-X. See [GNN-Dove](https://www.frontiersin.org/articles/10.3389/fmolb.2021.647915/full)<br>.
'CCD4PPI': 5 models generated following 5-fold cross validation procedure on the 400 target complexes. The conformations are generated by MAXDo<br>.